diff --git a/.github/workflows/test.yml b/.github/workflows/test.yml index 522e183..c833216 100644 --- a/.github/workflows/test.yml +++ b/.github/workflows/test.yml @@ -12,7 +12,7 @@ jobs: runs-on: ubuntu-latest strategy: matrix: - python-version: ["3.8", "3.9", "3.10", "3.11"] + python-version: ["3.9", "3.10", "3.11"] steps: - uses: actions/checkout@v4 diff --git a/ms2rescore/__init__.py b/ms2rescore/__init__.py index 8b4a1ee..73535fa 100644 --- a/ms2rescore/__init__.py +++ b/ms2rescore/__init__.py @@ -1,6 +1,6 @@ """MSĀ²Rescore: Sensitive PSM rescoring with predicted MSĀ² peak intensities and RTs.""" -__version__ = "3.1.1" +__version__ = "3.1.2" from warnings import filterwarnings diff --git a/pyproject.toml b/pyproject.toml index f829cce..ce03a3f 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -30,23 +30,23 @@ classifiers = [ "Development Status :: 5 - Production/Stable", ] dynamic = ["version"] -requires-python = ">=3.8" +requires-python = ">=3.9" dependencies = [ "cascade-config>=0.4.0", "click>=7", "customtkinter>=5,<6", - "deeplc>=2.2", - "deeplcretrainer>=0.2", + "deeplc>=3.1", + "deeplcretrainer", "im2deep>=0.1.3", "jinja2>=3", "lxml>=4.5", - "mokapot>=0.9", + "mokapot>=0.10", "ms2pip>=4.0.0", "ms2rescore_rs>=0.3.0", - "numpy>=1.16.0", - "pandas>=1.0", + "numpy>=1.25", + "pandas>=1", "plotly>=5", - "psm_utils>=0.9", + "psm_utils>=1.1", "pyteomics>=4.7.2", "rich>=12", "tomli>=2; python_version < '3.11'",