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contig names with nhap > 2 #725

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chklopp opened this issue Nov 12, 2024 · 0 comments
Open

contig names with nhap > 2 #725

chklopp opened this issue Nov 12, 2024 · 0 comments

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@chklopp
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chklopp commented Nov 12, 2024

Hi,

I'm trying to assemble a tetraploïd genome and hifiasm produces 4 haplotypes named hap1 to hap4.
But the contigs in the hap files are all names h1tg000... Could you name the contigs using their haplotype?

Cheers,
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