DESCRIPTION

Package: TreeCorTreat
Type: Package
Title: Tree-based correlation screen for phenotype-associated transcriptomic features and cell types
Version: 0.9.0
Date: 2021-10-25
Author: Boyang Zhang, Hongkai Ji
Maintainer: Boyang Zhang <bzhang34@jhu.edu>
Description: TreeCorTreat is a software tool that supports multi-resolution and multi-feature type association analysis in single-cell data. We also introduce TreeCorTreat plot as a new visualization tool to summarize the association information in such data.
Depends: R (>= 3.6.1)
RoxygenNote: 7.1.1
VignetteBuilder: knitr
Encoding: UTF-8
License: GPL-3
LazyData: true
Imports: 
    Seurat,
    RColorBrewer,
    dplyr,
    ggplot2,
    ggraph,
    harmony,
    limma,
    parallel,
    pheatmap,
    MASS,
    Matrix,
    ape,
    combinat,
    ggrepel,
    grDevices,
    igraph,
    lmtest,
    patchwork,
    tidyr
Suggests: 
    rmarkdown,
    knitr