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insufficient memory for the Java Runtime Environment - CPU #341

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james-vincent opened this issue Feb 6, 2024 · 1 comment

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bug

james-vincent commented Feb 6, 2024

Are you sure this is a bug?
Not sure

Describe the bug
CPU version juicer.sh gets java memory options set like so:

Picked up _JAVA_OPTIONS: -Xmx150000m -Xms150000m

Seems to be no way to override this as it is hard coded in the script:
export _JAVA_OPTIONS="-Xmx150000m -Xms150000m"

Running CPU version on the small test data set MiSeq GM12878.

Centos 7.9, java 1.8 , 32G memory

james-vincent added the bug label

BRNiu commented Apr 27, 2024

Hi! Could you let me know if you have any solution?

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