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[BUG] Fixed subsampling in highly imbalances datasets giving subsamples with only a single class #2305

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ferewi
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@ferewi ferewi commented Nov 5, 2024

Reference Issues/PRs

Fixes #1726

What does this implement/fix? Explain your changes.

Added new attribute 'max_subsamples' to subsample multiple times in case of unbalanced datasets giving subsamples with only one class. This caused TDE and HC2 to fail.
If a subsample with only a sinlge class is found, subsampling is repeated until the number of classes in the subsample is >1 or until max_subsamples is reached. In the latter case an AttributeError is raised.

Does your contribution introduce a new dependency? If yes, which one?

No

Any other comments?

In the Issue I proposed two ideas how to fix this and I went for a modified option 1 that does not lead to potentially infinite loops as it is more than 3 times faster compared to option 2 (StratifiedShuffleSplit).

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…f unbalanced datasets giving subsamples with only one class.
@aeon-actions-bot aeon-actions-bot bot added bug Something isn't working classification Classification package labels Nov 5, 2024
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Thank you for contributing to aeon

I have added the following labels to this PR based on the title: [ $\color{#d73a4a}{\textsf{bug}}$ ].
I have added the following labels to this PR based on the changes made: [ $\color{#BCAE15}{\textsf{classification}}$ ]. Feel free to change these if they do not properly represent the PR.

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Is there a situation where you wouldn't want to continue until there is a viable subsample? I would just use a while loop and continue until you do. No parameter needed then.

The only time this will backfire is if there is only 1 class in the input, but we should catch that higher up in input verification IMO.

@TonyBagnall
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this is good but we need a little time to discuss, I will put it on the agenda for the dev meeting on friday

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ferewi commented Nov 14, 2024

I was a bit caught up last week hence my late reply. @MatthewMiddlehurst I think your're right, the new parameter is actually not needed. I was thinking that given a large unbalanced dataset, the chance for drawing a subsample that contains just one class is high, but given the subsample size of 70% this chance is around 0.5 in the worst case. So just resampling until a valid sample is obtained should be fine.

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LGTM, thanks.

@MatthewMiddlehurst MatthewMiddlehurst merged commit 2e98d33 into aeon-toolkit:main Nov 14, 2024
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@all-contributors add @ferewi for bug

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@MatthewMiddlehurst

I've put up a pull request to add @ferewi! 🎉

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[BUG] HC2 sporadic CI failure
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