diff --git a/qiskit/circuit/instruction.py b/qiskit/circuit/instruction.py
index 557d7df21ee1..cbb0ebd19faa 100644
--- a/qiskit/circuit/instruction.py
+++ b/qiskit/circuit/instruction.py
@@ -341,6 +341,7 @@ def add_decomposition(self, decomposition):
         sel.add_equivalence(self, decomposition)
 
     @property
+    @deprecate_func(since="1.3.0", removal_timeline="in Qiskit 2.0.0", is_property=True)
     def duration(self):
         """Get the duration."""
         return self._duration
@@ -351,6 +352,7 @@ def duration(self, duration):
         self._duration = duration
 
     @property
+    @deprecate_func(since="1.3.0", removal_timeline="in Qiskit 2.0.0", is_property=True)
     def unit(self):
         """Get the time unit of duration."""
         return self._unit
diff --git a/qiskit/circuit/quantumcircuit.py b/qiskit/circuit/quantumcircuit.py
index 780efba5faf1..0a151a8476e3 100644
--- a/qiskit/circuit/quantumcircuit.py
+++ b/qiskit/circuit/quantumcircuit.py
@@ -1145,17 +1145,35 @@ def __init__(
         for var, initial in declarations:
             self.add_var(var, initial)
 
-        self.duration: int | float | None = None
-        """The total duration of the circuit, set by a scheduling transpiler pass.  Its unit is
-        specified by :attr:`unit`."""
-        self.unit = "dt"
-        """The unit that :attr:`duration` is specified in."""
+        self._duration = None
+        self._unit = "dt"
         self.metadata = {} if metadata is None else metadata
         """Arbitrary user-defined metadata for the circuit.
- 
+
         Qiskit will not examine the content of this mapping, but it will pass it through the
         transpiler and reattach it to the output, so you can track your own metadata."""
 
+    @property
+    @deprecate_func(since="1.3.0", removal_timeline="in Qiskit 2.0.0", is_property=True)
+    def duration(self):
+        """The total duration of the circuit, set by a scheduling transpiler pass.  Its unit is
+        specified by :attr:`unit`."""
+        return self._duration
+
+    @duration.setter
+    def duration(self, value: int | float | None):
+        self._duration = value
+
+    @property
+    @deprecate_func(since="1.3.0", removal_timeline="in Qiskit 2.0.0", is_property=True)
+    def unit(self):
+        """The unit that :attr:`duration` is specified in."""
+        return self._unit
+
+    @unit.setter
+    def unit(self, value):
+        self._unit = value
+
     @classmethod
     def _from_circuit_data(cls, data: CircuitData, add_regs: bool = False) -> typing.Self:
         """A private constructor from rust space circuit data."""
diff --git a/releasenotes/notes/deprecate-unit-duration-48b76c957bac5691.yaml b/releasenotes/notes/deprecate-unit-duration-48b76c957bac5691.yaml
new file mode 100644
index 000000000000..15c205c5a850
--- /dev/null
+++ b/releasenotes/notes/deprecate-unit-duration-48b76c957bac5691.yaml
@@ -0,0 +1,25 @@
+---
+deprecations_circuits:
+  - |
+    The :attr:`.QuantumCircuit.unit` and :attr:`.QuantumCircuit.duration`
+    attributes have been deprecated and will be removed in Qiskit 2.0.0. These
+    attributes were used to track the estimated duration and unit of that
+    duration to execute on the circuit. However, the values of these attributes
+    were always limited, as they would only be properly populated if the
+    transpiler were run with the correct settings. The duration was also only a
+    guess based on the longest path on the sum of the duration of
+    :class:`.DAGCircuit` and wouldn't ever correctly account for control flow
+    or conditionals in the circuit.
+  - |
+    The :attr:`.Instruction.duration` and :attr:`.Instruction.unit` attributes
+    have been deprecated and will be removed in Qiskit 2.0.0. These attributes
+    were used to attach a custom execution duration and unit for that duration
+    to an individual instruction. However, the source of truth of the duration
+    of a gate is the :class:`.BackendV2` :class:`.Target` which contains
+    the duration for each instruction supported on the backend. The duration of
+    an instruction is not something that's typically user adjustable and is
+    an immutable property of the backend. If you were previously using this
+    capability to experiment with different durations for gates you can
+    mutate the :attr:`.InstructionProperties.duration` field in a given
+    :class:`.Target` to set a custom duration for an instruction on a backend
+    (the unit is always in seconds in the :class:`.Target`).
diff --git a/test/utils/base.py b/test/utils/base.py
index 0038f7772ebf..7645aca04ee5 100644
--- a/test/utils/base.py
+++ b/test/utils/base.py
@@ -156,6 +156,28 @@ def setUpClass(cls):
             module="qiskit_aer",
         )
 
+        # Remove these four filters in Qiskit 2.0.0 when we remove unit and duration
+        warnings.filterwarnings(
+            "ignore",
+            category=DeprecationWarning,
+            message=r".*The property.*qiskit.circuit.instruction.Instruction.unit.*",
+        )
+        warnings.filterwarnings(
+            "ignore",
+            category=DeprecationWarning,
+            message=r".*The property.*qiskit.circuit.instruction.Instruction.duration.*",
+        )
+        warnings.filterwarnings(
+            "ignore",
+            category=DeprecationWarning,
+            message=r".*The property.*qiskit.circuit.quantumcircuit.QuantumCircuit.unit.*",
+        )
+        warnings.filterwarnings(
+            "ignore",
+            category=DeprecationWarning,
+            message=r".*The property.*qiskit.circuit.quantumcircuit.QuantumCircuit.duration.*",
+        )
+
         # Safe to remove once `FakeBackend` is removed (2.0)
         warnings.filterwarnings(
             "ignore",  # If "default", it floods the CI output