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Can I use nextsv for ultra-long nanopore data? #22

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yweii opened this issue Sep 23, 2023 · 1 comment

yweii commented Sep 23, 2023

Can I use nextsv for ultra-long nanopore data?

Collaborator

fangli80 commented Sep 23, 2023

Yes. Please select minimap2 as the aligner. I have not tested other tools for mapping ultra-long reads.

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