From c1fc1ea3897d31ddefc52ffddb4b33e3df1b4c0d Mon Sep 17 00:00:00 2001 From: "github-actions[bot]" <41898282+github-actions[bot]@users.noreply.github.com> Date: Mon, 11 Nov 2024 19:20:20 +0000 Subject: [PATCH 1/2] Add https://zenodo.org/records/10103316 --- resources/nfdi4bioimage.yml | 20 ++++++++++++++++++++ 1 file changed, 20 insertions(+) diff --git a/resources/nfdi4bioimage.yml b/resources/nfdi4bioimage.yml index 06170e49..662f851e 100644 --- a/resources/nfdi4bioimage.yml +++ b/resources/nfdi4bioimage.yml @@ -6108,3 +6108,23 @@ resources: + +- authors: "Tulok, Silke, Fabig, Gunar, Vogelsang, Andy, Kugel, Thomas, M\xFCller-Reichert,\ + \ Thomas" + description: The Core Facility Cellular Imaging (CFCI) at the Faculty of Medicine + Carl Gustav Carus (TU Dresden) is currently running a pilot project for testing + the use and handling of the OMERO software. This is done together with interested + users of the imaging facility and a research group. Currently, we are pushing forward + this pilot study on a small scale without any data steward. Our experiences argue + so far for giving data management issues into the hands of dedicated personnel not + fully involved in research projects. As funding agencies will ask for higher and + higher standards for implementing FAIRdata principles in the future, this will be + a releva + license: cc-by-4.0 + name: 'Report on a pilot study: Implementation of OMERO for microscopy data management' + num_downloads: 80 + publication_date: '2023-11-10' + url: + - https://zenodo.org/records/10103316 + - https://doi.org/10.5281/zenodo.10103316 + \ No newline at end of file From c81296a8ccc91324d18cd8c5d269b58f6d22e6a1 Mon Sep 17 00:00:00 2001 From: Robert Haase Date: Mon, 18 Nov 2024 15:42:34 +0100 Subject: [PATCH 2/2] fixed broken yaml --- resources/nfdi4bioimage.yml | 37 ++++++++++++++++++------------------- 1 file changed, 18 insertions(+), 19 deletions(-) diff --git a/resources/nfdi4bioimage.yml b/resources/nfdi4bioimage.yml index b7e71b9f..e98dd819 100644 --- a/resources/nfdi4bioimage.yml +++ b/resources/nfdi4bioimage.yml @@ -6815,25 +6815,6 @@ resources: With this template it is possible to create a csv-file, that can be used to annotate a dataset in OMERO using the annotation script (https://github.com/ome/omero-scripts/blob/develop/omero/annotation_scripts/). - -- authors: "Tulok, Silke, Fabig, Gunar, Vogelsang, Andy, Kugel, Thomas, M\xFCller-Reichert,\ - \ Thomas" - description: The Core Facility Cellular Imaging (CFCI) at the Faculty of Medicine - Carl Gustav Carus (TU Dresden) is currently running a pilot project for testing - the use and handling of the OMERO software. This is done together with interested - users of the imaging facility and a research group. Currently, we are pushing forward - this pilot study on a small scale without any data steward. Our experiences argue - so far for giving data management issues into the hands of dedicated personnel not - fully involved in research projects. As funding agencies will ask for higher and - higher standards for implementing FAIRdata principles in the future, this will be - a releva - license: cc-by-4.0 - name: 'Report on a pilot study: Implementation of OMERO for microscopy data management' - num_downloads: 80 - publication_date: '2023-11-10' - url: - - https://zenodo.org/records/10103316 - - https://doi.org/10.5281/zenodo.10103316 How to use: @@ -6912,3 +6893,21 @@ resources: - https://zenodo.org/records/7890311 - https://doi.org/10.5281/zenodo.7890311 +- authors: "Tulok, Silke, Fabig, Gunar, Vogelsang, Andy, Kugel, Thomas, M\xFCller-Reichert,\ + \ Thomas" + description: The Core Facility Cellular Imaging (CFCI) at the Faculty of Medicine + Carl Gustav Carus (TU Dresden) is currently running a pilot project for testing + the use and handling of the OMERO software. This is done together with interested + users of the imaging facility and a research group. Currently, we are pushing forward + this pilot study on a small scale without any data steward. Our experiences argue + so far for giving data management issues into the hands of dedicated personnel not + fully involved in research projects. As funding agencies will ask for higher and + higher standards for implementing FAIRdata principles in the future, this will be + a releva + license: cc-by-4.0 + name: 'Report on a pilot study: Implementation of OMERO for microscopy data management' + num_downloads: 80 + publication_date: '2023-11-10' + url: + - https://zenodo.org/records/10103316 + - https://doi.org/10.5281/zenodo.10103316